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SRX25612476: Tapirus indicus PacBio HiFi sequencing
1 PACBIO_SMRT (Sequel II) run: 1.6M spots, 25.9G bases, 15.5Gb downloads

Design: SAGE blue pippin
Submitted by: G10K
Study: Tapirus indicus (Malayan tapir) genome, mTapInd1, sequence data
show Abstracthide Abstract
The Malayan Tapir (Tapirus indicus) is the only living Tapir species outside of the Americas. It is native to Southeast Asia, from the Malay Peninsula to Sumatra. It is endangered since 2008, currently comprising fewer than 2,500 mature individuals (modified from Wikipedia entry). This sample is from a male born in the Philadelphia Zoo, USA, later transferred to the San Diego Zoo, where a blood sample was collected and supplied by Oliver Ryder and Cynthia Steiner to be used to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP) and conservation research. Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis.
Sample: Animal sample from Tapirus indicus (Malayan tapir) for VGP reference genome, mTapInd1
SAMN37096863 • SRS22259025 • All experiments • All runs
Organism: Tapirus indicus
Library:
Name: mTapInd1_PacBio_HiFi_fastq_3
Instrument: Sequel II
Strategy: WGS
Source: GENOMIC
Selection: size fractionation
Layout: SINGLE
Runs: 1 run, 1.6M spots, 25.9G bases, 15.5Gb
Run# of Spots# of BasesSizePublished
SRR301445361,586,55425.9G15.5Gb2024-08-06

ID:
34619537

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